MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Ligilactobacillus murinus 2_2BalbC1BO2_S2

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from a total of 52 genomes

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PROKKA Genome Annotation:

contigs: 224

bases: 2,332,310 bps

CDS: 2,313

rRNA: 6

Repeat region:

tmRNA: 1

tRNA: 61

misc RNA:

Total features: 2,381

Total number of protein coding genes annotated/found: 2,313

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Molecule ^	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range	Gene Product Name
SEQF5054\|JADGLU010000212.1	SEQF5054_02313	NA AA	918/306	117-1034	hypothetical protein
SEQF5054\|JADGLU010000092.1	SEQF5054_01192	NA AA	963/321	118-1080	IS30 family transposase IS1252
SEQF5054\|JADGLU010000094.1	SEQF5054_01204	NA AA	207/69	144-350	hypothetical protein
SEQF5054\|JADGLU010000070.1	SEQF5054_00820	NA AA	819/273	154-972	IS3 family transposase ISEnfa5
SEQF5054\|JADGLU010000174.1	SEQF5054_01915	NA AA	96/32	157-62	hypothetical protein
SEQF5054\|JADGLU010000022.1	SEQF5054_00236	NA AA	1320/440	163-1482	Serine/threonine exchanger SteT
SEQF5054\|JADGLU010000153.1	SEQF5054_01761	NA AA	321/107	167-487	hypothetical protein
SEQF5054\|JADGLU010000035.1	SEQF5054_00324	NA AA	222/74	176-397	hypothetical protein
SEQF5054\|JADGLU010000016.1	SEQF5054_00216	NA AA	378/126	177-554	Virulence protein
SEQF5054\|JADGLU010000166.1	SEQF5054_01837	NA AA	162/54	179-18	hypothetical protein
SEQF5054\|JADGLU010000039.1	SEQF5054_00348	NA AA	2163/721	188-2350	ATP-dependent Clp protease ATP-binding subunit ClpE
SEQF5054\|JADGLU010000194.1	SEQF5054_02176	NA AA	5544/1848	196-5739	hypothetical protein
SEQF5054\|JADGLU010000044.1	SEQF5054_00419	NA AA	180/60	198-19	hypothetical protein
SEQF5054\|JADGLU010000149.1	SEQF5054_01748	NA AA	1092/364	213-1304	23S rRNA (uracil-C(5))-methyltransferase RlmCD
SEQF5054\|JADGLU010000032.1	SEQF5054_00276	NA AA	108/36	222-329	hypothetical protein
SEQF5054\|JADGLU010000008.1	SEQF5054_00079	NA AA	1179/393	231-1409	hypothetical protein
SEQF5054\|JADGLU010000161.1	SEQF5054_01819	NA AA	228/76	257-30	DNA gyrase subunit A
SEQF5054\|JADGLU010000050.1	SEQF5054_00431	NA AA	564/188	259-822	hypothetical protein
SEQF5054\|JADGLU010000040.1	SEQF5054_00371	NA AA	612/204	262-873	hypothetical protein
SEQF5054\|JADGLU010000060.1	SEQF5054_00597	NA AA	222/74	265-486	Putative transposase InsK for insertion sequence element IS150

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Page last updated: July 7, 2021 08:39:35